* pyIPINE.py by Woonghee Lee, Ph.D.
* Python script for submitting and retrieving an I-PINE job
* Last updated: December 6, 2018

Parameters:
 --in=      [control_file.txt]      Read a control file
 --out=     [control_file.txt]      Write an output file
 --job_id=  [JOB ID]                Job ID
 --bmrb=    [BMRB ID]               BioMagResBank Entry ID or BMRB file
 
Operations:
 --submit                           Submit a job to I-PINE
 --download                         Download a job from I-PINE
 --web                              Open a web report in a web browser
 --template                         Template of a control file
 --test                             Make an assign file from BMRB entry
 --example, -e                      Show a simple example workflow
 --help, -h                         Print this message

Usage:

  a) submit a job
    python pyIPINE.py --in=control_file.txt --submit

  b) download a job
    python pyIPINE.py --in=control_file.txt --download      OR
    python pyIPINE.py --job_id=[JOB ID] --download

  c) open a web report in a browser
    python pyIPINE.py --in=control_file.txt --web           OR
    python pyIPINE.py --job_id=[JOB ID] --web

  d) print out a control template file
    python pyIPINE.py --template

  e) write a control template file
    python pyIPINE.py --out=control_file.txt --template

  f) write a test assignment file from a BMRB entry
    python pyIPINE.py --bmrb=[BMRB ID] --out=assign_file.str --test